The Vital Role of Neurotransmitters and Nutrients in Brain-Gut Health

How the gut, brain and mood are linked

Penelope Ling

7/8/20254 min read

Good fresh food helps mental health
Good fresh food helps mental health

Understanding the brain-gut connection is essential to improving mental and digestive health. Your brain and gut communicate constantly via the gut-brain axis, a complex network involving nerves, hormones, and neurotransmitters. However, this communication relies on proper nutrition. Specific vitamins, minerals, and amino acids support the production and balance of neurotransmitters that regulate mood, digestion, and immune response.

In this article, we’ll explore key nutrients—like Vitamin B12, Omega-3 fatty acids, Zinc, Vitamin B6, and Amino Acids—and how they support neurotransmitter function and overall brain-gut wellness.

What Are Neurotransmitters and Why Do They Matter?

Neurotransmitters are chemical messengers used by the nervous system to transmit signals between neurons. Key neurotransmitters like serotonin, dopamine, GABA, and acetylcholine regulate emotions, stress, appetite, sleep, and digestion. Interestingly, over 90% of serotonin is produced in the gut, not the brain. This makes gut health crucial to mental well-being. Without the right building blocks—amino acids, vitamins, and minerals—your body struggles to produce these critical chemicals.

Vitamin B12: Energising the Brain and Gut

Vitamin B12 (cobalamin) is essential for healthy nerve cells and red blood cell formation. It plays a critical role in synthesizing neurotransmitters, particularly serotonin and dopamine. A B12 deficiency can cause fatigue, poor concentration, irritability, and even depressive symptoms. It also affects gut motility, leading to constipation or bloating. B12 is found naturally in animal products like eggs, meat, and dairy, and it’s often supplemented in plant-based diets.

Low stomach acid, aging, and gut conditions like IBS or Crohn’s disease can hinder B12 absorption, making supplementation essential in some cases.

Omega-3 Fatty Acids (EPA/DHA): Anti-Inflammatory Powerhouses

Omega-3 fatty acids—particularly EPA (eicosapentaenoic acid) and DHA (docosahexaenoic acid)—are vital for brain structure and function. These fats are incorporated into cell membranes, influencing how brain cells communicate. EPA and DHA help regulate neuroinflammation, a key factor in both depression and digestive disorders. Studies show that omega-3s can enhance serotonin and dopamine transmission, improving mood and cognitive performance.

Since the body can't produce these fats on its own, dietary sources like oily fish (salmon, mackerel, sardines) or high-quality fish oil supplements are essential.

4. Zinc: A Small Mineral with a Big Impact

Zinc is often overlooked, yet it plays a critical role in over 300 enzymatic reactions, including those involved in neurotransmitter activity and gut barrier integrity. Zinc supports the production of GABA (a calming neurotransmitter) and helps regulate dopamine, serotonin, and norepinephrine. Low zinc levels are linked to mood disorders, brain fog, and digestive issues like leaky gut syndrome.

Food sources include pumpkin seeds, oysters, red meat, and legumes. Gut inflammation can impair zinc absorption, making zinc-rich diets or supplementation beneficial in cases of chronic stress or gut dysfunction.

Vitamin B6: The Cofactor for Calm

Vitamin B6 (pyridoxine) is a critical coenzyme in the production of several neurotransmitters, including serotonin, dopamine, GABA, and norepinephrine.

It also supports homocysteine metabolism and helps regulate cortisol—the stress hormone. B6 helps convert tryptophan (an amino acid) into serotonin, which influences both mood and digestion. Deficiency in B6 can result in irritability, anxiety, sleep disturbances, and IBS-like symptoms. Good sources of B6 include poultry, bananas, potatoes, fortified cereals, and sunflower seeds.

Amino Acids: The Building Blocks of Neurotransmitters

Amino acids are the raw materials your body uses to build neurotransmitters. For example:

  • Tryptophan creates Serotonin

  • Tyrosine creates Dopamine and norepinephrine

  • Glutamine creates GABA

Without adequate protein intake and digestion, the body can’t manufacture these neurotransmitters efficiently. Stress, gut dysbiosis, and poor diet can disrupt amino acid availability and balance.

Include protein-rich foods like chicken, eggs, fish, legumes, and nuts in your meals helps maintain neurotransmitter synthesis and mental balance.

Gut Health and the Enteric Nervous System (ENS)

The gut has its own nervous system—the enteric nervous system, often called the "second brain." It contains around 100 million neurons and communicates with the central nervous system through the vagus nerve. The balance of neurotransmitters in the gut impacts how efficiently food is digested, how quickly the gut moves (motility), and how well the immune system responds to pathogens. Nutrition that supports microbiome diversity, gut lining integrity, and inflammation control (including the vitamins and minerals mentioned above) is essential for the ENS to function well.

How Stress Disrupts Neurotransmitter and Nutrient Balance

Chronic stress affects digestion and brain chemistry simultaneously. Cortisol can impair nutrient absorption, disrupt the microbiome, and deplete neurotransmitter stores. Under stress, your body prioritizes survival—redirecting energy away from digestion and reducing the effectiveness of B vitamins, zinc, and amino acids. Stress also increases glutamate, an excitatory neurotransmitter, which can create feelings of anxiety and tension.

Practices like hypnotherapy, mindfulness, and balanced nutrition help restore this equilibrium.

Supporting the Brain-Gut Axis Through Nutrition

To optimize both mental and digestive health, focus on a balanced, nutrient-dense diet that includes:

  • Lean protein for amino acids

  • Healthy fats like omega-3s

  • Whole grains and leafy greens for B vitamins

  • Zinc-rich foods like seeds and seafood

  • Probiotic and prebiotic foods for gut flora

Supplements can support deficiencies, especially during periods of stress or illness, but should be used with guidance.

Improving brain-gut health isn’t just about fixing symptoms—it’s about building long-term resilience. When your brain and gut are nourished, everything from mood to digestion, energy, and immunity improves.

As a therapist who has been working since 2007, I noticed early on that people's mental well-being and what they ate were linked. This is backed up by the research on the gut biome and strategies now accepted as causing some mental health issues. During my study of nutrition and Integrated medicine with the College of Medicine back in 2016, I realised that diet and supplements could help, but they could affect medications. So if you are thinking of trying certain supplements, I advise you to visit your GP to make sure they do not have any negative effect on your meds.

I for one do take magnesium, and it's helped my sleep. I take glucosamine with turmeric, and it's helped my flexibility, and I also take collagen because it helps my joints.

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